I was going to U2U you Paul and ask if your info was the same as Geoff has posted, if its different then I would still like to have it, but if its the same then thanks for the offer Paul.

Kev

Skidlids

I have a factory 998 manual for my 998s, if your still desperate I`ll delve into my garage and have a look for you.

Thanks for the help and offers guys, I have nearly completed assessing the differences between the two front harness connections and am glad to report its only down to a couple of wires. Currently drawing up a Excel document listing the Pin outs for both the 998 and the 916 using Pin letter, wire colour and function it performs/supports.
By the ned of work tomorrow I hope to be able to come home and reconfigure the 916 front harness to suit the 998s main harness, then it will be just a mater of lengthening it by about 70mm.

Kev

Well i've had the wire cutters and soldering iron out and have now had the engine turning over on the button, very slowly as the battery is as flat as a flat thing can be.
I also had to reconfigure the clocks wiring harness to get the neutral light to work off the later engine.
Once I'm happy that everything is wired correctly it will be time to lengthen the harness by 70mm or so required.

Kev
PS also found a wiring diagram in the 998FE owners manual in PDF on www.ducati.com